If you’ve been dreaming of a nostalgic treat that’s both delicious and thoughtfully healthier, say hello to these Homemade Twinkies | High Protein & Gluten Free (+ Rainbow!). These delightful cakes keep all the childhood magic you remember but bring a fresh twist with gluten free ingredients, a protein-packed filling, and a joyful pop of rainbow sprinkles. They’re soft, fluffy, and bursting with strawberry cream goodness, making them the perfect indulgence that feels just right!

Ingredients You’ll Need
The beauty of this recipe lies in how simple but intentional each ingredient is, creating the perfect balance of flavor, texture, and that iconic gentle sweetness. From the wholesome coconut flour to the vibrant rainbow sprinkles, every component plays a crucial role in making these homemade Twinkies truly extraordinary.
- Coconut flour: Provides a gluten free, fiber-rich base with a subtle nutty flavor that keeps the cakes tender.
- Gluten free baking powder: Helps the Twinkies rise nicely and stay light and fluffy.
- Salt: Enhances all the other flavors without overpowering.
- Honey: Offers natural sweetness with a floral note, balancing the tangy cream filling.
- Unsweetened apple sauce: Adds moisture and a hint of fruity sweetness, helping keep the batter soft.
- Plain Greek yogurt (2-4% fat): Delivers protein and creaminess both in the batter and filling, crucial for texture and nutrition.
- Unsweetened vanilla almond milk: Extends moisture content and infuses subtle vanilla flavor.
- Vanilla extract: Elevates the overall aroma and taste with rich warmth.
- Whole eggs: Provide structure and richness for the batter.
- Egg whites: Whipped to soft peaks to lighten the batter, making the Twinkies airy and fluffy.
- Rainbow sprinkles: Deliver that playful, colorful touch inside and out, celebrating the “rainbow” aspect of this recipe.
- Light strawberry cream cheese: Perfectly balances the tangy yogurt to create the luscious filling everyone will love.
How to Make Homemade Twinkies | High Protein & Gluten Free (+ Rainbow!)
Step 1: Prep Your Tools and Oven
Start by heating your oven to 350 degrees Fahrenheit. Take your two silicone Twinkie pans and spritz them generously with cooking spray to ensure your cakes slide out easily. Placing the pans on baking sheets makes handling safer and cleanup simpler.
Step 2: Combine Dry Ingredients
In a medium bowl, whisk together the coconut flour, gluten free baking powder, and salt. This dry mixture forms the base and ensures even baking and proper rise for those light and fluffy Twinkies.
Step 3: Mix the Wet Ingredients
Grab a separate bowl and combine the honey, unsweetened apple sauce, vanilla almond milk, plain Greek yogurt, whole eggs, and vanilla extract. Blending these together creates the flavorful, moist foundation your Twinkie batter needs.
Step 4: Whip the Egg Whites
In another clean bowl, whip the egg whites until soft peaks form. This is key to the airy texture, as folding the whipped whites into the batter will lighten it beautifully and give the Twinkies that tender crumb.
Step 5: Bring It All Together
Slowly stir the wet ingredients into the dry mixture until just combined — don’t overmix here! Gently fold in about half of the whipped egg whites first, then carefully fold in the rest along with a teaspoon of rainbow sprinkles to add a fun surprise inside the Twinkie itself.
Step 6: Bake the Twinkies
Sprinkle the remaining rainbow sprinkles evenly on the bottom of your prepared Twinkie molds. Fill each pocket about two-thirds full with batter. Bake for 30 minutes, then carefully remove from the oven. Grease your baking sheets and carefully pop the Twinkies out of the molds onto the sheets, rounded side up. Bake for an additional 7 to 10 minutes until they turn lightly golden. Let them cool completely before filling.
Step 7: Prepare the Strawberry Protein Cream Filling
While your Twinkies are cooling, mix together the Greek yogurt, light strawberry cream cheese, and the remaining rainbow sprinkles. Transfer this creamy dream to a piping bag fitted with a star tip—it’s going to make filling your Twinkies an absolute joy.
Step 8: Fill and Enjoy
Once the Twinkies are fully cooled, gently insert the piping tip into the bottom of each cake and inject the strawberry cream filling in several spots. This way, every bite bursts with that sweet and tangy creaminess you crave. Now, dig in and savor the magic of your Homemade Twinkies | High Protein & Gluten Free (+ Rainbow!).
How to Serve Homemade Twinkies | High Protein & Gluten Free (+ Rainbow!)

Garnishes
Enhance each Twinkie by dusting a light sprinkle of powdered sugar or adding a few colorful sprinkles on top for an eye-catching presentation. A fresh strawberry slice alongside makes for a beautiful and complementary topping that ties into the strawberry cream filling.
Side Dishes
Pair your Twinkies with a warm cup of herbal tea or freshly brewed coffee to balance the sweetness. For a wholesome contrast, fresh fruit salad with berries or a handful of crunchy nuts refreshes the palate and boosts the nutrition.
Creative Ways to Present
Serve your Twinkies in a tiered dessert tray at parties for an instant crowd-pleaser. For kids’ celebrations, wrap each one in colorful wax paper secured with a ribbon. You can also slice them lengthwise and layer with extra cream and fruit for a playful “cake sandwich” dessert experience.
Make Ahead and Storage
Storing Leftovers
Keep your homemade Twinkies in an airtight container in the refrigerator to maintain their freshness. They’ll stay soft and delicious for up to 3 days, so you can enjoy that burst of high protein and gluten free goodness anytime.
Freezing
If you want to save some for later, wrap each Twinkie individually in plastic wrap and place in a freezer-safe bag or container. Frozen Twinkies can last up to 2 months—perfect for a quick sweet treat whenever craving strikes.
Reheating
For the best texture, thaw frozen Twinkies overnight in the refrigerator. If you want a warm treat, gently reheat in the oven at 300 degrees Fahrenheit for 5 to 7 minutes, but avoid microwaving as it can make the texture less appealing.
FAQs
Can I use regular flour instead of coconut flour?
This recipe is designed specifically for coconut flour to keep it gluten free. Using regular flour will change the texture and may require adjusting liquid amounts, so stick with coconut flour for best results.
Is the filling dairy-free?
No, the filling contains Greek yogurt and cream cheese. To make it dairy-free, you could substitute with plant-based yogurt and vegan cream cheese alternatives, but keep in mind the texture may vary slightly.
Can I omit the rainbow sprinkles?
Absolutely! The sprinkles add fun color and texture, but the recipe will still taste fantastic without them. Consider adding finely chopped nuts or freeze-dried fruit as alternative mix-ins.
How high in protein are these Twinkies?
Thanks to the Greek yogurt and eggs, each Twinkie offers a nice protein boost with about 4 grams per serving, making them a guilt-free indulgence that fuels your body.
Can I make these Twinkies vegan?
This particular recipe relies on eggs and dairy for structure and creaminess. Vegan adaptations would require alternative binding agents and dairy substitutes, which might change the texture. Experimenting with aquafaba and vegan cream cheese could be a fun project!
Final Thoughts
There’s something incredibly satisfying about making your own treats from scratch, especially when they’re as fun, colorful, and wholesome as these Homemade Twinkies | High Protein & Gluten Free (+ Rainbow!). They’re bursting with flavor and just the right amount of nostalgia wrapped up in a better-for-you package. I can’t recommend them enough—grab your ingredients, get baking, and treat yourself to a modern twist on a classic favorite!
PrintHomemade Twinkies | High Protein & Gluten Free (+ Rainbow!)
These Homemade Twinkies with Strawberry Protein Cream Filling offer a healthier, gluten-free, and high-protein twist on the classic childhood treat. Featuring a moist coconut flour sponge cake and a creamy yogurt and strawberry cream cheese filling, they are perfect as a guilt-free dessert or snack.
- Prep Time: 15 minutes
- Cook Time: 40 minutes
- Total Time: 55 minutes
- Yield: 18 Twinkies 1x
- Category: Dessert
- Method: Baking
- Cuisine: American
- Diet: Gluten Free
Ingredients
Cake
- 1 cup coconut flour
- 2 tsp gluten free baking powder
- 1/8 tsp salt
- 1/4 cup honey
- 3/4 cup unsweetened applesauce
- 1/2 cup plain 2-4% Greek yogurt
- 1/2 cup plus 2 tbsp unsweetened vanilla almond milk
- 2 tsp vanilla extract
- 3 whole eggs
- 4 egg whites
- 2 tsp rainbow sprinkles
Filling
- 1/2 cup plain 2-4% Greek yogurt
- 6 tbsp light strawberry cream cheese
- 2 tsp rainbow sprinkles
Instructions
- Prep the Oven and Pans: Preheat your oven to 350°F (177°C). Lightly spritz two Twinkie silicone pans with cooking spray and place them on baking sheets to stabilize during baking.
- Mix Dry Ingredients: In a medium bowl, combine coconut flour, gluten-free baking powder, and salt, stirring well to evenly distribute the leavening.
- Mix Wet Ingredients: In another bowl, whisk together honey, unsweetened applesauce, almond milk, Greek yogurt, whole eggs, and vanilla extract until smooth.
- Whip Egg Whites: In a separate bowl, beat the egg whites until they form soft peaks, which will help lighten the batter.
- Combine Mixtures: Add the wet ingredients to the dry ingredients and stir until just combined. Gently fold in one-third of the whipped egg whites to loosen the batter, then carefully fold in the remaining egg whites along with 1 teaspoon of the rainbow sprinkles to maintain the airy texture.
- Fill the Molds: Sprinkle the remaining rainbow sprinkles evenly onto the bottoms of the silicone Twinkie molds. Fill each mold about two-thirds full with the batter to allow room for rising.
- Bake First Stage: Bake the filled molds in the preheated oven for 30 minutes until the cakes have risen and set.
- Unmold and Bake Again: Grease the baking sheets again to prevent sticking. Carefully remove the Twinkies from the molds and place them rounded side up on the baking sheets. Bake for an additional 7 to 10 minutes until the exterior turns lightly golden brown.
- Cool: Let the Twinkies cool completely on the baking sheets after removing them from the oven to set fully and make filling easier.
- Prepare Filling: Meanwhile, in a small bowl, mix together Greek yogurt, light strawberry cream cheese, and 2 teaspoons of rainbow sprinkles until smooth. Transfer the filling to a piping bag fitted with a star tip for easy insertion.
- Fill Twinkies: Once Twinkies are fully cooled, carefully insert the piping tip into the bottom side of each cake in multiple spots and fill with the strawberry protein cream cheese mixture to achieve that classic creamy center.
- Serve and Enjoy: Serve the homemade Twinkies fresh and enjoy a nostalgic treat made healthier with high protein and gluten-free ingredients.
Notes
- Ensure the egg whites are whipped to soft peaks for optimal lightness in the cake batter.
- Use silicone Twinkie molds for easy removal and best shape creation.
- Allow Twinkies to cool completely before filling to prevent cream from melting or leaking.
- The rainbow sprinkles add a fun visual touch but can be omitted or substituted as desired.
- Store filled Twinkies in the refrigerator and consume within 3-4 days for freshness.